No. words: 1632; after pruning: 1606


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 14.4 (1,1:675)  657  0.30 0.00 0.15  MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1        2   676 (159)  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   (123)   674     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   797 
  131    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1     9 
  139  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   659 
  152    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1    31 
  216  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   582 
  220    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1    99 
  232  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   566 
  236    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   115 
  276  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   522 
  284    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   163 
  336  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   462 
  340    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   219 
  348  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   450 
  352    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   231 
  380  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   418 
  384    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   263 
  404  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   394 
  436    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   315 
  464  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   334 
  508    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   387 
  516  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   282 
  556    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   435 
  560  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   238 
  564    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   443 
  572  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   226 
  672    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   551 
  676  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1   122 
  704    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   583 
  708  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1    90 
  756    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   635 
  781  C MoSU005R_H05_BE494028Ld03P015F02F081R1_044.ab1    17 
  789    MoSU005F_H05_BE494028Ld03P015F02F081F1_044.ab1   668 
Contig length: old 956, new 956

Contig length: old 956, new 956
New start: 0