No. words: 1593; after pruning: 1567


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:695)  686  0.14 0.00 0.00  MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1        1   696 (84)  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   (117)   696     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   813 
  125    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1     8 
  133  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   681 
  151    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1    34 
  211  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   603 
  215    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1    98 
  223  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   591 
  243    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   126 
  247  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   567 
  255    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   138 
  267  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   547 
  283    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   166 
  287  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   527 
  295    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   178 
  303  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   511 
  307    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   190 
  331  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   483 
  335    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   218 
  343  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   471 
  347    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   230 
  359  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   455 
  391    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   274 
  399  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   415 
  411    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   294 
  423  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   391 
  427    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   310 
  455  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   359 
  503    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   386 
  511  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   303 
  543    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   426 
  551  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1   263 
  791    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   674 
  795  C MoSU005R_A06_BE494028Ld04P015F02F081R1_037.ab1    19 
  799    MoSU005F_A06_BE494028Ld04P015F02F081F1_037.ab1   682 
Contig length: old 897, new 897

Contig length: old 897, new 897
New start: 0