No. words: 1607; after pruning: 1581


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 15.0 (1,1:697)  685  0.00 0.00 0.14  MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1        2   698 (137)  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   (76)   696     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   772 
   84    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1     9 
   92  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   681 
  109    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1    35 
  113  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   660 
  117    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1    43 
  169  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   604 
  173    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1    99 
  185  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   588 
  189    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   115 
  209  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   564 
  217    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   143 
  233  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   540 
  241    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   167 
  261  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   512 
  265    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   191 
  289  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   484 
  293    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   219 
  333  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   440 
  337    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   263 
  357  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   416 
  373    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   299 
  377  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   396 
  389    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   315 
  413  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   360 
  445    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   371 
  449  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   324 
  457    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   383 
  469  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   304 
  481    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   407 
  485  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   288 
  497    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   423 
  501  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   272 
  645    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   571 
  649  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1   124 
  757    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   683 
  765  C MoSU005R_C06_BE494028Ld06P015F02F081R1_038.ab1     8 
  769    MoSU005F_C06_BE494028Ld06P015F02F081F1_038.ab1   695 
Contig length: old 909, new 909

Contig length: old 909, new 909
New start: 0