No. words: 1635; after pruning: 1609


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 15.1 (1,1:695)  687  0.00 0.00 0.00  MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1        2   696 (124)  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   (120)   695     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   815 
  128    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1     9 
  136  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   680 
  152    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1    33 
  204  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   612 
  208    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1    89 
  212  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   604 
  216    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1    97 
  228  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   588 
  232    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   113 
  260  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   556 
  264    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   145 
  272  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   544 
  284    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   165 
  332  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   484 
  336    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   217 
  344  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   472 
  352    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   233 
  364  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   452 
  368    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   249 
  376  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   440 
  380    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   261 
  400  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   416 
  412    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   293 
  420  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   396 
  424    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   305 
  428  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   388 
  440    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   321 
  448  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   368 
  504    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   385 
  512  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   304 
  668    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   549 
  672  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   144 
  688    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   569 
  692  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1   124 
  796    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   677 
  800  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1    16 
  804    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   685 
  808  C MoSU005R_E06_BE494028Ld08P015F02F081R1_039.ab1     8 
  812    MoSU005F_E06_BE494028Ld08P015F02F081F1_039.ab1   693 
Contig length: old 939, new 939

Contig length: old 939, new 939
New start: 0