No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.3 (1,1:712)  695  0.00 0.14 0.14  MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1        2   713 (137)  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   (101)   712     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   813 
  126    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1    25 
  134  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   680 
  150    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1    49 
  210  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   604 
  214    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   113 
  278  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   536 
  282    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   181 
  330  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   484 
  334    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   233 
  342  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   472 
  350    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   249 
  362  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   452 
  366    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   265 
  374  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   440 
  378    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   277 
  398  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   416 
  414    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   313 
  422  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   392 
  434    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   333 
  446  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   368 
  450    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   349 
  458  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   356 
  466    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   365 
  470  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   344 
  498    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   397 
  510  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   304 
  534    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   433 
  538  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   276 
  554    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   453 
  558  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   256 
  666    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   565 
  674  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   140 
  686    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   585 
  690  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   124 
  698    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   597 
  702  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1   112 
  786    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   685 
  790  C MoSU005R_H06_BE494028Ld11P015F02F081R1_048.ab1    24 
  794    MoSU005F_H06_BE494028Ld11P015F02F081F1_048.ab1   693 
Contig length: old 950, new 951

Contig length: old 951, new 951
New start: 0