No. words: 1023; after pruning: 983


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.1 (1,1:559)  383  2.16 0.24 0.00  MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1        4   420 (0)  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   (45)   558   141 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   603 
   61    MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1    18 
   74  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   530 
   82    MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1    39 
   92  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   512 
  116    MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1    73 
  120  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   484 
  220    MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1   177 
  224  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   380 
  232    MoSU033F_C08_BE494028Ta11P015F02P024E111F1_060.ab1   189 
  236  C MoSU033R_C08_BE494028Ta11P015F02P024E111R1_060.ab1   368 
Contig length: old 603, new 603

Contig length: old 603, new 603
New start: 0