No. words: 1092; after pruning: 1066


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.0 (1,1:541)  466  1.81 0.00 0.00  MoSU033F_D08_BE494028Ta12P015F02P024E111F1_058.ab1        3   500 (0)  C MoSU033R_D08_BE494028Ta12P015F02P024E111R1_058.ab1   (52)   540    43 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C MoSU033R_D08_BE494028Ta12P015F02P024E111R1_058.ab1   592 
  116    MoSU033F_D08_BE494028Ta12P015F02P024E111F1_058.ab1    66 
  120  C MoSU033R_D08_BE494028Ta12P015F02P024E111R1_058.ab1   473 
  204    MoSU033F_D08_BE494028Ta12P015F02P024E111F1_058.ab1   154 
  208  C MoSU033R_D08_BE494028Ta12P015F02P024E111R1_058.ab1   385 
Contig length: old 592, new 592

Contig length: old 592, new 592
New start: 0