No. words: 1017; after pruning: 977


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.3 (1,1:554)  332  6.25 0.00 0.24  MoSU033F_G08_BE494028Ta15P015F02P024E111F1_052.ab1        1   416 (0)  C MoSU033R_G08_BE494028Ta15P015F02P024E111R1_052.ab1   (47)   554   140 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  146 nodes

 75 str. conn. components

Path
    1  C MoSU033R_G08_BE494028Ta15P015F02P024E111R1_052.ab1   601 
   63    MoSU033F_G08_BE494028Ta15P015F02P024E111F1_052.ab1    16 
   77  C MoSU033R_G08_BE494028Ta15P015F02P024E111R1_052.ab1   525 
   81    MoSU033F_G08_BE494028Ta15P015F02P024E111F1_052.ab1    34 
   95  C MoSU033R_G08_BE494028Ta15P015F02P024E111R1_052.ab1   507 
Contig length: old 601, new 601

Contig length: old 601, new 601
New start: 0