No. words: 1019; after pruning: 979


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 2.9 (1,1:558)  366  3.37 0.24 0.00  MoSU033F_H08_BE494028Ta16P015F02P024E111F1_050.ab1        4   418 (0)  C MoSU033R_H08_BE494028Ta16P015F02P024E111R1_050.ab1   (44)   557   142 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C MoSU033R_H08_BE494028Ta16P015F02P024E111R1_050.ab1   601 
   64    MoSU033F_H08_BE494028Ta16P015F02P024E111F1_050.ab1    22 
   77  C MoSU033R_H08_BE494028Ta16P015F02P024E111R1_050.ab1   525 
   81    MoSU033F_H08_BE494028Ta16P015F02P024E111F1_050.ab1    39 
   95  C MoSU033R_H08_BE494028Ta16P015F02P024E111R1_050.ab1   507 
Contig length: old 601, new 601

Contig length: old 601, new 601
New start: 0