No. words: 1194; after pruning: 1168


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.7 (1,1:554)  532  0.18 0.36 0.00  MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1        6   554 (56)  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   (33)   551     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   584 
   60    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1    30 
   81  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   504 
   93    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1    63 
   97  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   488 
  229    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   199 
  241  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   344 
  245    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   215 
  253  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   332 
  273    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   243 
  281  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   304 
  329    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   299 
  353  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   232 
  437    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   407 
  441  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   144 
  445    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   415 
  465  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   120 
  473    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   443 
  477  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1   108 
  485    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   455 
  489  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1    96 
  497    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   467 
  505  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1    80 
  517    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   487 
  521  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1    64 
  549    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   519 
  553  C MoSU033R_A09_BE494028Ta17P015F02P024E111R1_079.ab1    32 
  573    MoSU033F_A09_BE494028Ta17P015F02P024E111F1_079.ab1   543 
Contig length: old 639, new 640

Contig length: old 640, new 640
New start: 0