No. words: 1191; after pruning: 1165


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.0 (1,1:554)  532  0.18 0.36 0.00  MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1        6   554 (54)  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1   (32)   551     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1   583 
   55    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1    26 
  148  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1   436 
  336    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1   307 
  368  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1   216 
  484    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1   455 
  488  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1    96 
  496    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1   467 
  504  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1    80 
  508    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1   479 
  536  C MoSU033R_B09_BE494028Ta18P015F02P024E111R1_077.ab1    48 
  556    MoSU033F_B09_BE494028Ta18P015F02P024E111F1_077.ab1   527 
Contig length: old 636, new 637

Contig length: old 637, new 636
New start: 0 
D Change at: 54; seg lengths: entry 0, contig 1