No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.1 (1,1:541)  525  0.19 0.19 0.00  MoSU033F_D09_BE494028Ta20P015F02P024E111F1_073.ab1        4   542 (67)  C MoSU033R_D09_BE494028Ta20P015F02P024E111R1_073.ab1   (43)   540     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C MoSU033R_D09_BE494028Ta20P015F02P024E111R1_073.ab1   583 
   59    MoSU033F_D09_BE494028Ta20P015F02P024E111F1_073.ab1    18 
   80  C MoSU033R_D09_BE494028Ta20P015F02P024E111R1_073.ab1   504 
   88    MoSU033F_D09_BE494028Ta20P015F02P024E111F1_073.ab1    47 
   96  C MoSU033R_D09_BE494028Ta20P015F02P024E111R1_073.ab1   488 
  572    MoSU033F_D09_BE494028Ta20P015F02P024E111F1_073.ab1   531 
Contig length: old 650, new 650

Contig length: old 650, new 650
New start: 0