No. words: 1209; after pruning: 1183


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.2 (1,1:560)  538  0.18 0.18 0.18  MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1        4   559 (48)  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   (44)   558     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   602 
   64    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1    22 
   77  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   526 
   93    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1    51 
   97  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   506 
  233    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   191 
  237  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   366 
  245    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   203 
  249  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   354 
  341    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   299 
  353  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   250 
  457    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   415 
  465  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1   138 
  497    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   455 
  513  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1    90 
  517    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   475 
  521  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1    82 
  553    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   511 
  561  C MoSU033R_F09_BE494028Ta22P015F02P024E111R1_069.ab1    42 
  569    MoSU033F_F09_BE494028Ta22P015F02P024E111F1_069.ab1   527 
Contig length: old 648, new 649

Contig length: old 649, new 649
New start: 0