No. words: 1176; after pruning: 1150


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.7 (1,1:535)  523  0.19 0.00 0.00  MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1        5   536 (56)  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   (52)   532     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   584 
   60    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1    12 
   73  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   512 
   85    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1    37 
   97  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   488 
  177    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   129 
  189  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   396 
  233    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   185 
  237  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   348 
  345    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   297 
  353  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   232 
  461    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   413 
  465  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   120 
  473    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   425 
  477  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1   108 
  485    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   437 
  489  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1    96 
  497    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   449 
  501  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1    84 
  505    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   457 
  509  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1    76 
  549    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   501 
  553  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1    32 
  557    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   509 
  561  C MoSU033R_G09_BE494028Ta23P015F02P024E111R1_067.ab1    24 
  573    MoSU033F_G09_BE494028Ta23P015F02P024E111F1_067.ab1   525 
Contig length: old 640, new 640

Contig length: old 640, new 640
New start: 0