No. words: 1189; after pruning: 1149


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.3 (1,1:549)  533  0.37 0.18 0.00  MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1        4   550 (47)  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   (44)   548     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   592 
   60    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1    18 
   99  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   494 
  115    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1    73 
  127  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   466 
  247    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1   205 
  251  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   342 
  343    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1   301 
  351  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   242 
  455    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1   413 
  463  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1   130 
  495    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1   453 
  499  C MoSU033R_H09_BE494028Ta24P015F02P024E111R1_065.ab1    94 
  575    MoSU033F_H09_BE494028Ta24P015F02P024E111F1_065.ab1   533 
Contig length: old 639, new 639

Contig length: old 639, new 639
New start: 0