No. words: 1210; after pruning: 1184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.3 (1,1:572)  507  2.47 0.35 0.18  MoSU033F_E07_BE494028Td05P015F02P024E111F1_055.ab1        6   571 (38)  C MoSU033R_E07_BE494028Td05P015F02P024E111R1_055.ab1   (32)   569     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C MoSU033R_E07_BE494028Td05P015F02P024E111R1_055.ab1   601 
  145    MoSU033F_E07_BE494028Td05P015F02P024E111F1_055.ab1   116 
  149  C MoSU033R_E07_BE494028Td05P015F02P024E111R1_055.ab1   453 
  205    MoSU033F_E07_BE494028Td05P015F02P024E111F1_055.ab1   176 
  209  C MoSU033R_E07_BE494028Td05P015F02P024E111R1_055.ab1   393 
  585    MoSU033F_E07_BE494028Td05P015F02P024E111F1_055.ab1   556 
Contig length: old 637, new 638

Contig length: old 638, new 638
New start: 0