No. words: 1506; after pruning: 1452


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:682)  664  0.44 0.15 0.00  MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1        2   683 (91)  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   (49)   683     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   732 
   66    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1    17 
   78  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   655 
   95    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1    46 
  119  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   614 
  131    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1    82 
  151  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   582 
  155    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   106 
  167  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   566 
  191    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   142 
  203  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   530 
  215    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   166 
  223  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   510 
  311    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   262 
  315  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   418 
  463    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   414 
  471  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   262 
  499    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   450 
  507  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   226 
  567    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   518 
  571  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   162 
  595    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   546 
  599  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   134 
  623    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   574 
  627  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1   106 
  643    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   594 
  651  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1    82 
  689    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   640 
  693  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1    40 
  697    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   648 
  705  C MoSU035R_D05_BE495325As02P019C04P019C101R1_041.ab1    28 
  709    MoSU035F_D05_BE495325As02P019C04P019C101F1_041.ab1   660 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0 
S Change at: 725; seg lengths: entry 1, contig 1