No. words: 898; after pruning: 872


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.9 (1,1:311)  306  0.00 0.00 0.00  MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1        3   312 (134)  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1   (142)   310     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1   452 
  178    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1    38 
  186  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1   267 
  266    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   126 
  270  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1   183 
  278    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   138 
  294  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1   159 
  330    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   190 
  358  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1    95 
  362    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   222 
  366  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1    87 
  370    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   230 
  394  C MoSU004R_E05_BE495400Ld01P005H04H101R1_035.ab1    59 
  406    MoSU004F_E05_BE495400Ld01P005H04H101F1_035.ab1   266 
Contig length: old 586, new 586

Contig length: old 586, new 586
New start: 0