No. words: 895; after pruning: 869


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.7 (1,1:311)  307  0.00 0.00 0.00  MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1        3   312 (133)  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1   (140)   310     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1   450 
  176    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1    38 
  180  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1   271 
  236    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1    98 
  240  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1   211 
  284    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1   146 
  292  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1   159 
  304    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1   166 
  364  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1    87 
  368    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1   230 
  396  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1    55 
  408    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1   270 
  412  C MoSU004R_F05_BE495400Ld02P005H04H101R1_043.ab1    39 
  416    MoSU004F_F05_BE495400Ld02P005H04H101F1_043.ab1   278 
Contig length: old 583, new 583

Contig length: old 583, new 583
New start: 0