No. words: 894; after pruning: 868


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.5 (1,1:309)  299  0.00 0.32 0.00  MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1        3   310 (133)  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1   (142)   309     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1   451 
  176    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1    35 
  184  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1   268 
  236    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1    95 
  244  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1   208 
  264    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1   123 
  276  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1   176 
  320    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1   179 
  356  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1    96 
  360    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1   219 
  364  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1    88 
  368    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1   227 
  396  C MoSU004R_B06_BE495400Ld06P005H04H101R1_045.ab1    56 
  404    MoSU004F_B06_BE495400Ld06P005H04H101F1_045.ab1   263 
Contig length: old 584, new 584

Contig length: old 584, new 584
New start: 0