No. words: 896; after pruning: 870


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.4 (1,1:310)  302  0.00 0.32 0.00  MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1        3   311 (135)  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1   (140)   310     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1   450 
  174    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1    35 
  178  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1   273 
  266    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   127 
  278  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1   173 
  282    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   143 
  298  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1   153 
  310    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   171 
  370  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1    81 
  374    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   235 
  394  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1    57 
  398    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   259 
  422  C MoSU004R_H06_BE495400Ld12P005H04H101R1_048.ab1    29 
  426    MoSU004F_H06_BE495400Ld12P005H04H101F1_048.ab1   287 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0