No. words: 424; after pruning: 398


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 2.4 (1,1:154)  145  0.00 0.00 0.66  MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1        1   151 (56)  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1   (63)   154     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  76 nodes

 40 str. conn. components

Path
    1  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1   217 
  107    MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1    44 
  111  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1   107 
  119    MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1    56 
  135  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1    83 
  155    MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1    92 
  159  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1    59 
  167    MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1   104 
  171  C MoSU030R_C08_BE495400Ta11P024G02P005H101R1_060.ab1    47 
  183    MoSU030F_C08_BE495400Ta11P024G02P005H101F1_060.ab1   120 
Contig length: old 269, new 270

Contig length: old 270, new 270
New start: 0