No. words: 435; after pruning: 409


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.2 (1,1:164)  162  0.00 0.00 0.00  MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1        2   165 (51)  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1   (55)   164     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1   219 
   95    MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1    41 
   99  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1   121 
  107    MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1    53 
  111  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1   109 
  119    MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1    65 
  135  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1    85 
  147    MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1    93 
  159  C MoSU030R_D08_BE495400Ta12P024G02P005H101R1_058.ab1    61 
  171    MoSU030F_D08_BE495400Ta12P024G02P005H101F1_058.ab1   117 
Contig length: old 270, new 270

Contig length: old 270, new 270
New start: 0