No. words: 434; after pruning: 408


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:164)  158  0.00 0.00 0.61  MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1        1   165 (50)  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1   (55)   164     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1   219 
   95    MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1    40 
   99  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1   121 
  123    MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1    68 
  135  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1    85 
  143    MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1    88 
  147  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1    73 
  167    MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1   112 
  175  C MoSU030R_E08_BE495400Ta13P024G02P005H101R1_056.ab1    45 
  183    MoSU030F_E08_BE495400Ta13P024G02P005H101F1_056.ab1   128 
Contig length: old 269, new 270

Contig length: old 270, new 270
New start: 0