No. words: 1403; after pruning: 1377


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.8 (1,1:1319)   81  0.00 0.00 0.00  MoSU013F_F05_BE496863At02P018C01P018C071F1_037.ab1      590   672 (0)  C MoSU013R_F05_BE496863At02P018C01P018C071R1_037.ab1   (0)   731   649 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  44 nodes

 24 str. conn. components

Path
    1    MoSU013F_F05_BE496863At02P018C01P018C071F1_037.ab1     1 
  637  C MoSU013R_F05_BE496863At02P018C01P018C071R1_037.ab1   684 
  641    MoSU013F_F05_BE496863At02P018C01P018C071F1_037.ab1   641 
  645  C MoSU013R_F05_BE496863At02P018C01P018C071R1_037.ab1   676 
  653    MoSU013F_F05_BE496863At02P018C01P018C071F1_037.ab1   653 
  661  C MoSU013R_F05_BE496863At02P018C01P018C071R1_037.ab1   660 
Contig length: old 1320, new 1320

Contig length: old 1320, new 1320
New start: 0