No. words: 1493; after pruning: 1467


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:1346)  143  0.00 0.00 0.00  MoSU013F_C06_BE496863Ld05P018C01P018C071F1_044.ab1      557   702 (0)  C MoSU013R_C06_BE496863Ld05P018C01P018C071R1_044.ab1   (0)   791   646 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1    MoSU013F_C06_BE496863Ld05P018C01P018C071F1_044.ab1     1 
  644  C MoSU013R_C06_BE496863Ld05P018C01P018C071R1_044.ab1   704 
  648    MoSU013F_C06_BE496863Ld05P018C01P018C071F1_044.ab1   648 
  660  C MoSU013R_C06_BE496863Ld05P018C01P018C071R1_044.ab1   688 
  672    MoSU013F_C06_BE496863Ld05P018C01P018C071F1_044.ab1   672 
  680  C MoSU013R_C06_BE496863Ld05P018C01P018C071R1_044.ab1   668 
Contig length: old 1347, new 1347

Contig length: old 1347, new 1347
New start: 0