No. words: 615; after pruning: 589


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:323)  235  0.00 0.00 0.00  MoSU007F_C05_BE497999As01P015E04E101F1_043.ab1       90   324 (56)  C MoSU007R_C05_BE497999As01P015E04E101R1_043.ab1   (0)   235     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  120 nodes

 62 str. conn. components

Path
    1    MoSU007F_C05_BE497999As01P015E04E101F1_043.ab1     1 
  121  C MoSU007R_C05_BE497999As01P015E04E101R1_043.ab1   204 
  173    MoSU007F_C05_BE497999As01P015E04E101F1_043.ab1   173 
Contig length: old 380, new 380

Contig length: old 380, new 380
New start: 0