No. words: 854; after pruning: 828


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -1.6 -1.6 (1,1:264)  240  0.39 0.39 0.77  MoSU007F_G05_BE497999Ld01P015E04E101F1_035.ab1        5   263 (153)  C MoSU007R_G05_BE497999Ld01P015E04E101R1_035.ab1   (177)   261     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.6       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  116 nodes

 60 str. conn. components

Path
    1  C MoSU007R_G05_BE497999Ld01P015E04E101R1_035.ab1   438 
  324    MoSU007F_G05_BE497999Ld01P015E04E101F1_035.ab1   150 
Contig length: old 589, new 590

Contig length: old 590, new 590
New start: 0