No. words: 1007; after pruning: 981


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 5.3 (1,1:343)  329  0.00 0.00 0.59  MoSU007F_B06_BE497999Ld04P015E04E101F1_046.ab1        5   345 (162)  C MoSU007R_B06_BE497999Ld04P015E04E101R1_046.ab1   (161)   339     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU007R_B06_BE497999Ld04P015E04E101R1_046.ab1   500 
  337    MoSU007F_B06_BE497999Ld04P015E04E101F1_046.ab1   180 
Contig length: old 663, new 664

Contig length: old 664, new 664
New start: 0