No. words: 1173; after pruning: 1147


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 7.0 (1,1:461)  433  0.44 0.22 0.00  MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1        8   461 (135)  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   (122)   455     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   577 
  166    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1    50 
  170  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   408 
  194    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1    78 
  198  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   380 
  214    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1    98 
  222  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   356 
  226    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   110 
  234  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   344 
  246    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   130 
  254  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   324 
  262    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   146 
  270  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   308 
  278    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   162 
  282  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   296 
  286    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   170 
  294  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   284 
  298    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   182 
  306  C MoSU002R_H07_BE498418Ld02P005C04C101R1_060.ab1   272 
  326    MoSU002F_H07_BE498418Ld02P005C04C101F1_060.ab1   210 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0