No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:459)  446  0.00 0.22 0.00  MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1        1   460 (139)  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   (119)   461     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   580 
  157    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1    37 
  161  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   420 
  169    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1    49 
  173  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   408 
  185    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1    65 
  193  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   388 
  197    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1    77 
  201  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   380 
  213    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1    93 
  225  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   356 
  229    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   109 
  241  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   340 
  245    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   125 
  253  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   328 
  265    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   145 
  277  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   304 
  281    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   161 
  285  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   296 
  289    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   169 
  293  C MoSU002R_B08_BE498418Ld04P005C04C101R1_061.ab1   288 
  301    MoSU002F_B08_BE498418Ld04P005C04C101F1_061.ab1   181 
Contig length: old 719, new 719

Contig length: old 719, new 719
New start: 0