No. words: 1180; after pruning: 1154


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:453)  440  0.00 0.22 0.00  MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1        1   454 (143)  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   (128)   455     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   583 
  160    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1    31 
  164  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   420 
  196    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1    67 
  204  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   380 
  220    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1    91 
  244  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   340 
  252    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1   123 
  256  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   328 
  268    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1   139 
  272  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   312 
  284    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1   155 
  288  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   296 
  292    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1   163 
  296  C MoSU002R_G08_BE498418Ld09P005C04C101R1_056.ab1   288 
  304    MoSU002F_G08_BE498418Ld09P005C04C101F1_056.ab1   175 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0