No. words: 464; after pruning: 438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.7 (1,1:183)  177  0.00 0.00 0.00  MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1        1   183 (38)  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   (59)   184     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   243 
   63    MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1     4 
   71  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   173 
   91    MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1    32 
   99  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   145 
  119    MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1    60 
  131  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   113 
  135    MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1    76 
  139  C MoSU016R_E11_BE498418Ta15P023G04P005C101R1_087.ab1   105 
  143    MoSU016F_E11_BE498418Ta15P023G04P005C101F1_087.ab1    84 
Contig length: old 280, new 280

Contig length: old 280, new 280
New start: 0