No. words: 606; after pruning: 580


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:241)  236  0.41 0.00 0.00  MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1        1   242 (69)  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   (53)   242     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  120 nodes

 62 str. conn. components

Path
    1  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   295 
   69    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    16 
   73  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   223 
   85    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    32 
   89  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   207 
  101    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    48 
  113  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   183 
  117    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    64 
  133  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   163 
  137    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    84 
  145  C MoSU016R_A09_BE498418Ta19P005C04P023B051R1_079.ab1   151 
  149    MoSU016F_A09_BE498418Ta19P005C04P023B051F1_079.ab1    96 
Contig length: old 364, new 364

Contig length: old 364, new 364
New start: 0