No. words: 480; after pruning: 454


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.9 (1,1:204)  191  0.49 0.00 0.49  MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1        1   205 (36)  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   (35)   204     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  98 nodes

 51 str. conn. components

Path
    1  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   239 
   59    MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1    24 
   71  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   169 
  103    MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1    69 
  107  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   133 
  111    MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1    77 
  115  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   125 
  119    MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1    85 
  127  C MoSU016R_B12_BE498418Ta19P023G04P005C101R1_094.ab1   113 
  139    MoSU016F_B12_BE498418Ta19P023G04P005C101F1_094.ab1   105 
Contig length: old 275, new 275

Contig length: old 275, new 275
New start: 0