No. words: 780; after pruning: 754


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.3 (1,1:350)  339  0.29 0.00 0.00  MoSU017F_B02_BE498418Ta20P005C04P023F051F1_014.ab1        5   351 (50)  C MoSU017R_B02_BE498418Ta20P005C04P023F051R1_014.ab1   (32)   347     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C MoSU017R_B02_BE498418Ta20P005C04P023F051R1_014.ab1   379 
  336    MoSU017F_B02_BE498418Ta20P005C04P023F051F1_014.ab1   308 
  340  C MoSU017R_B02_BE498418Ta20P005C04P023F051R1_014.ab1    40 
  352    MoSU017F_B02_BE498418Ta20P005C04P023F051F1_014.ab1   324 
  356  C MoSU017R_B02_BE498418Ta20P005C04P023F051R1_014.ab1    24 
  364    MoSU017F_B02_BE498418Ta20P005C04P023F051F1_014.ab1   336 
Contig length: old 429, new 429

Contig length: old 429, new 429
New start: 0 
S Change at: 375; seg lengths: entry 1, contig 1