No. words: 609; after pruning: 583


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:253)  250  0.00 0.00 0.00  MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1        1   254 (65)  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   (36)   254     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  128 nodes

 66 str. conn. components

Path
    1  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   290 
   43    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1     7 
   47  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   244 
   71    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1    35 
   83  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   208 
   91    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1    55 
   95  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   196 
  107    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1    71 
  115  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   176 
  119    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1    83 
  151  C MoSU016R_C09_BE498418Ta21P005C04P023B051R1_075.ab1   140 
  155    MoSU016F_C09_BE498418Ta21P005C04P023B051F1_075.ab1   119 
Contig length: old 355, new 355

Contig length: old 355, new 355
New start: 0