No. words: 615; after pruning: 589


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.5 (1,1:248)  241  0.40 0.00 0.00  MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1        2   249 (65)  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   (53)   248     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   301 
   81    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1    29 
   89  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   213 
   93    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1    41 
   97  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   205 
  105    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1    53 
  113  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   189 
  121    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1    69 
  149  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   153 
  153    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1   101 
  161  C MoSU016R_E07_BE498418Td07P005C04P023B051R1_055.ab1   141 
  165    MoSU016F_E07_BE498418Td07P005C04P023B051F1_055.ab1   113 
Contig length: old 366, new 366

Contig length: old 366, new 366
New start: 0