No. words: 485; after pruning: 459


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:206)  201  0.00 0.00 0.00  MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1        1   207 (36)  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   (35)   207     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   242 
   63    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1    28 
   75  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   168 
   79    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1    44 
   83  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   160 
   91    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1    56 
   99  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   144 
  103    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1    68 
  111  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1   132 
  119    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1    84 
  151  C MoSU016R_G10_BE498418Td09P023G04P005C101R1_068.ab1    92 
  159    MoSU016F_G10_BE498418Td09P023G04P005C101F1_068.ab1   124 
Contig length: old 278, new 278

Contig length: old 278, new 278
New start: 0