No. words: 1011; after pruning: 971


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:346)  332  0.29 0.29 0.00  MoSU009F_D02_BE499248Ld06P015C01P015C071F1_010.ab1        1   347 (165)  C MoSU009R_D02_BE499248Ld06P015C01P015C071R1_010.ab1   (151)   348     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU009R_D02_BE499248Ld06P015C01P015C071R1_010.ab1   499 
  419    MoSU009F_D02_BE499248Ld06P015C01P015C071F1_010.ab1   267 
  439  C MoSU009R_D02_BE499248Ld06P015C01P015C071R1_010.ab1    61 
  451    MoSU009F_D02_BE499248Ld06P015C01P015C071F1_010.ab1   299 
  459  C MoSU009R_D02_BE499248Ld06P015C01P015C071R1_010.ab1    41 
  477    MoSU009F_D02_BE499248Ld06P015C01P015C071F1_010.ab1   325 
Contig length: old 664, new 664

Contig length: old 664, new 664
New start: 0