No. words: 1724; after pruning: 1698


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:1443)  272  0.00 0.00 0.00  MoSU034F_C07_BE499652As01P019E02P019E081F1_059.ab1      590   869 (0)  C MoSU034R_C07_BE499652As01P019E02P019E081R1_059.ab1   (0)   855   576 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1    MoSU034F_C07_BE499652As01P019E02P019E081F1_059.ab1     1 
  697  C MoSU034R_C07_BE499652As01P019E02P019E081R1_059.ab1   748 
  713    MoSU034F_C07_BE499652As01P019E02P019E081F1_059.ab1   713 
  725  C MoSU034R_C07_BE499652As01P019E02P019E081R1_059.ab1   720 
  729    MoSU034F_C07_BE499652As01P019E02P019E081F1_059.ab1   729 
  753  C MoSU034R_C07_BE499652As01P019E02P019E081R1_059.ab1   692 
Contig length: old 1444, new 1444

Contig length: old 1444, new 1444
New start: 0