No. words: 1771; after pruning: 1745


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:1450)  289  0.00 0.31 0.94  MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1      615   934 (0)  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   (0)   837   520 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1    MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1     1 
  690  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   762 
  698    MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1   698 
  702  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   750 
  706    MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1   706 
  730  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   722 
  734    MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1   734 
  742  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   710 
  746    MoSU034F_A07_BE499652Tu01P019E02P019E081F1_063.ab1   746 
  754  C MoSU034R_A07_BE499652Tu01P019E02P019E081R1_063.ab1   698 
Contig length: old 1451, new 1451

Contig length: old 1451, new 1451
New start: 0