No. words: 1335; after pruning: 1309


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:903)  408  0.47 0.23 0.00  MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1       54   483 (0)  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   (0)   852   422 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1    MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1     1 
  310  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   595 
  326    MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1   326 
  338  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   567 
  342    MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1   342 
  358  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   547 
  370    MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1   370 
  374  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   531 
  386    MoSU004F_C09_BE500615As01P005D05D111F1_066.ab1   386 
  390  C MoSU004R_C09_BE500615As01P005D05D111R1_066.ab1   515 
Contig length: old 904, new 904

Contig length: old 904, new 904
New start: 0