No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:936)  323  1.71 0.28 0.00  MoSU004F_A10_BE500615Ld03P005D05D111F1_069.ab1       57   407 (0)  C MoSU004R_A10_BE500615Ld03P005D05D111R1_069.ab1   (0)   882   531 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  158 nodes

 81 str. conn. components

Path
    1    MoSU004F_A10_BE500615Ld03P005D05D111F1_069.ab1     1 
  274  C MoSU004R_A10_BE500615Ld03P005D05D111R1_069.ab1   664 
Contig length: old 937, new 937

Contig length: old 937, new 937
New start: 0