No. words: 1164; after pruning: 1138


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.7 (1,1:1025)  132  0.72 0.00 0.00  MoSU004F_D10_BE500615Ld06P005D05D111F1_078.ab1      232   369 (0)  C MoSU004R_D10_BE500615Ld06P005D05D111R1_078.ab1   (0)   795   658 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  68 nodes

 36 str. conn. components

Path
    1    MoSU004F_D10_BE500615Ld06P005D05D111F1_078.ab1     1 
  303  C MoSU004R_D10_BE500615Ld06P005D05D111R1_078.ab1   724 
  311    MoSU004F_D10_BE500615Ld06P005D05D111F1_078.ab1   311 
  323  C MoSU004R_D10_BE500615Ld06P005D05D111R1_078.ab1   704 
Contig length: old 1026, new 1026

Contig length: old 1026, new 1026
New start: 0