No. words: 1454; after pruning: 1428


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:1023)  400  0.70 0.23 0.46  MoSU004F_E10_BE500615Ld07P005D05D111F1_071.ab1      170   600 (0)  C MoSU004R_E10_BE500615Ld07P005D05D111R1_071.ab1   (0)   854   425 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1    MoSU004F_E10_BE500615Ld07P005D05D111F1_071.ab1     1 
  408  C MoSU004R_E10_BE500615Ld07P005D05D111R1_071.ab1   617 
  412    MoSU004F_E10_BE500615Ld07P005D05D111F1_071.ab1   412 
  456  C MoSU004R_E10_BE500615Ld07P005D05D111R1_071.ab1   569 
  468    MoSU004F_E10_BE500615Ld07P005D05D111F1_071.ab1   468 
  472  C MoSU004R_E10_BE500615Ld07P005D05D111R1_071.ab1   553 
  484    MoSU004F_E10_BE500615Ld07P005D05D111F1_071.ab1   484 
  488  C MoSU004R_E10_BE500615Ld07P005D05D111R1_071.ab1   537 
Contig length: old 1024, new 1024

Contig length: old 1024, new 1024
New start: 0