No. words: 1493; after pruning: 1467


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:918)  560  0.17 0.00 0.00  MoSU029F_G03_BE500615Sn25P005D05P024E061F1_019.ab1      120   693 (0)  C MoSU029R_G03_BE500615Sn25P005D05P024E061R1_019.ab1   (0)   800   227 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1    MoSU029F_G03_BE500615Sn25P005D05P024E061F1_019.ab1     1 
  279  C MoSU029R_G03_BE500615Sn25P005D05P024E061R1_019.ab1   641 
  287    MoSU029F_G03_BE500615Sn25P005D05P024E061F1_019.ab1   287 
  311  C MoSU029R_G03_BE500615Sn25P005D05P024E061R1_019.ab1   609 
  447    MoSU029F_G03_BE500615Sn25P005D05P024E061F1_019.ab1   447 
  451  C MoSU029R_G03_BE500615Sn25P005D05P024E061R1_019.ab1   469 
Contig length: old 919, new 919

Contig length: old 919, new 919
New start: 0