No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.4 (1,1:652)  616  0.31 0.31 0.15  MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1        7   654 (36)  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   (1)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1     1 
   44  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   611 
   55    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1    54 
  119  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   536 
  127    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   126 
  163  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   492 
  167    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   166 
  191  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   464 
  199    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   198 
  219  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   436 
  243    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   242 
  263  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   392 
  503    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   502 
  507  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   148 
  515    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   514 
  523  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   132 
  531    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   530 
  535  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1   120 
  567    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   566 
  579  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1    76 
  587    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   586 
  591  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1    64 
  595    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   594 
  599  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1    56 
  603    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   602 
  628  C MoSU032R_A12_BE500615Sn26P024C05P005D111R1_096.ab1    27 
  644    MoSU032F_A12_BE500615Sn26P024C05P005D111F1_096.ab1   643 
Contig length: old 690, new 691

Contig length: old 691, new 692
New start: 0 
I Change at: 18; seg lengths: entry 1, contig 0