No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.3 (1,1:601)  572  0.50 0.17 0.00  MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1        1   598 (50)  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1   (105)   602     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1   707 
  481    MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1   376 
  489  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1   219 
  609    MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1   504 
  613  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1    95 
  621    MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1   516 
  653  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1    55 
  661    MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1   556 
  693  C MoSU032R_D12_BE500615Sn29P024C05P005D111R1_090.ab1    14 
  697    MoSU032F_D12_BE500615Sn29P024C05P005D111F1_090.ab1   592 
Contig length: old 753, new 753

Contig length: old 753, new 753
New start: 0