No. words: 1718; after pruning: 1692


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.0 (1,1:857)  784  0.73 0.00 0.12  MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1        1   825 (4)  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   (32)   857    34 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   889 
   36    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1     4 
   68  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   822 
   85    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1    53 
  217  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   673 
  221    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   189 
  225  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   665 
  229    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   197 
  257  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   633 
  261    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   229 
  289  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   601 
  293    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   261 
  309  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   581 
  321    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   289 
  333  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   557 
  337    MoSU029F_H03_BE500615Sn30P005D05P024E061F1_017.ab1   305 
  345  C MoSU029R_H03_BE500615Sn30P005D05P024E061R1_017.ab1   545 
Contig length: old 889, new 889

Contig length: old 889, new 889
New start: 0